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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015901014.1_cds_XP_016451027.1_45422
CDS Infomation

[gene=LOC107775765] [db_xref=GeneID:107775765] [protein=HIPL1 protein-like] [protein_id=XP_016451027.1] [location=join(326653..326734,326831..326991,327408..328181,328266..328482,328640..328818,328905..329149,329773..330187)] [gbkey=CDS]
Sequence

ATGGGAAGGAGTCCTTTCATCATATTCATCATTTTTTTCAATCTTCTTTGTCCTTTTTCA
CTTCCCTTGTGTACTGATTCAAGGGCTCCTCTTCAGCAAAAGTCTCCTCTAACATTCTGT
CCTTACAATGGAACCTCCTCATGTTGCAACTCCACTGATGATAAACAACTTCAGACTCAA
TTTAATGCTATGAACATTACTGATCCTGGATGTGCTTCTCTTGTAAAATCTGTCCTCTGT
GCGAAGTGTGATAAATTTTCAGCAGAGCTGTTCAGAACTAATTCTGTTCCTCAACAACTT
CCGATCCTATGCAACTCCACAACTTCAGCAAATTCAACCCAAAATAGCCAAGCTAAGAAT
GACTTTTGCTCTAAAGTATGGACAACTTGTCGAAATGTGTCTATCATTAGTTCTCCTTTT
GCTGCTTCTGTCAAGTCCAATTTCACCAAGTTGACAGATCACTGGCAATCACAAACCGAT
TTCTGTAATGCATTTGGTGTAACTTCTGGTGATGGATCAGTATGCTTTGCTGGCGAACCT
GTCGTCTTAAATACAACCACATCTCCAAATCCTCCAGGCGGATTGTGCCTCGAGAAAATT
GGAAATGGTAGTTACCTCAATATGGTTGCTCATCCCGATGGCTCTAGTCGTGCTTTCTTC
TCGAATCAGCAAGGGAAAATATGGTTGGCTACCATTCCTGAAGTCGATTCAGGAAAGTTA
TTAGAGCTTGATGAAGCTAATCCTTTCCTGGACTTAACAGATGAAGTTCATTTTGATACT
GAGCTAGGGATGATGGGGATTGCATTTCATCCAAAGTTCTCACAAAATGGAAGATTCTTT
GCTTCGTTTAATTGCGATAAGCAAGCATGGCCTGGATGCGGAGGAAGATGTTCTTGTAAC
TCAAATGTGGATTGTGATCCATCAAAATTACCTAGTGATAGTGGTTCTGAGCCGTGCCAA
TATCAAGCTGTGATAGCTGAATTTACTGTTAGTGGGACAGCATCTCAGCCATCACAGGCA
AAAACTGCCAATCCAAAAGAAGTCAGAAGGATATTCACCATGGGCCTTCCGTTTACAGCA
CATCACGGAGGTCAGATTCTTTTTGGACCGACAGATGGATATTTGTACTTCATGATGGGT
GATGGAGGAGGTATAGGTGATCCTTACAATTTTTCCCAAAACAAGAAGTCATTACTGGGA
AAGATAATAAGGCTTGATGTTGATAGCTCACCTAGTGAAGCTGAGATGACCAAGCTCGGT
TTATGGGGAAACTACTCCATACCAAAGGATAATCCTTACATTGAAGATAAGGAGTTGCAG
CCTGAAATTTGGGCACTAGGAATGCGAAATCCGTGGCGCTGCAGTTTTGATTCTTCAAGA
CCATCTTACTTCATGTGTGCAGATGTAGGGCAGGATAAATTTGAAGAGGTGAATATAATC
AGCAAGGGTGGTAACTATGGTTGGCGAGTCTACGAGGGTCCCTATCTCTACACCCCTCAA
AAATTACCAGGAGGAAAAAATACATCTATAAGCTCAATAAACCCAATTTTCCCAGTTATG
GGATACAATCATTCTGATGTGAATAAGAATGGAGGGTCAGCCTCAATTACTGGTGGATAC
TTCTATAGGTCCTTCACTGATCCCTGCATGCATGGAAGGTATATTTTTGCAGATCTGTAT
GCAGGTTCCATGTGGGCAGGCACTGAAAATCCAGAGGACAGTGGAATATTTAACAACACT
CAAATATCTTTCAACTGTGCTCAGAAATCACCAATAGATTGTACCTTTGTTCCTGGAAGC
TCAGTTCCATCTTTGGGCTACATTTTTTCATATGGAGAGGATAACAACAAGGATATGTAT
GTCCTTGCAAGTAGTGGAGTTTACAGGGTTGTTCGTCCGAGTCGCTGTAAATACACTTGT
GCAAAGGAAGATTCTTCTGCTGTTGTTGATATCCCAGATGGTCCTGCTGCTGCTTCCCCT
CCTTCAGCAGCAATCATGTTAACAGGTTCATACAATAATAACTTGGTACTCATATTCTTG
TCTTTAATGTTGATGCTATCCAGTTGGTTTTAG

Peptide Sequence

PEP ID

XP_016451027.1
PEP Infomation

PREDICTED: HIPL1 protein-like [Nicotiana tabacum]
Sequence

MGRSPFIIFIIFFNLLCPFSLPLCTDSRAPLQQKSPLTFCPYNGTSSCCNSTDDKQLQTQ
FNAMNITDPGCASLVKSVLCAKCDKFSAELFRTNSVPQQLPILCNSTTSANSTQNSQAKN
DFCSKVWTTCRNVSIISSPFAASVKSNFTKLTDHWQSQTDFCNAFGVTSGDGSVCFAGEP
VVLNTTTSPNPPGGLCLEKIGNGSYLNMVAHPDGSSRAFFSNQQGKIWLATIPEVDSGKL
LELDEANPFLDLTDEVHFDTELGMMGIAFHPKFSQNGRFFASFNCDKQAWPGCGGRCSCN
SNVDCDPSKLPSDSGSEPCQYQAVIAEFTVSGTASQPSQAKTANPKEVRRIFTMGLPFTA
HHGGQILFGPTDGYLYFMMGDGGGIGDPYNFSQNKKSLLGKIIRLDVDSSPSEAEMTKLG
LWGNYSIPKDNPYIEDKELQPEIWALGMRNPWRCSFDSSRPSYFMCADVGQDKFEEVNII
SKGGNYGWRVYEGPYLYTPQKLPGGKNTSISSINPIFPVMGYNHSDVNKNGGSASITGGY
FYRSFTDPCMHGRYIFADLYAGSMWAGTENPEDSGIFNNTQISFNCAQKSPIDCTFVPGS
SVPSLGYIFSYGEDNNKDMYVLASSGVYRVVRPSRCKYTCAKEDSSAVVDIPDGPAAASP
PSAAIMLTGSYNNNLVLIFLSLMLMLSSWF

Transcript Sequence

Gene sequence data has not been registered.